No. words: 943; after pruning: 917


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:299)  288  0.00 0.33 0.00  BF484958Ld06P027G03P027G091F1_088.ab1        1   300 (193)  C BF484958Ld06P027G03P027G091R1_088.ab1   (149)   301     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  148 nodes

 76 str. conn. components

Path
    1  C BF484958Ld06P027G03P027G091R1_088.ab1   450 
  197    BF484958Ld06P027G03P027G091F1_088.ab1    47 
  201  C BF484958Ld06P027G03P027G091R1_088.ab1   250 
  213    BF484958Ld06P027G03P027G091F1_088.ab1    63 
  229  C BF484958Ld06P027G03P027G091R1_088.ab1   222 
  273    BF484958Ld06P027G03P027G091F1_088.ab1   123 
  297  C BF484958Ld06P027G03P027G091R1_088.ab1   154 
  305    BF484958Ld06P027G03P027G091F1_088.ab1   155 
Contig length: old 643, new 643

Contig length: old 643, new 643
New start: 0