No. words: 944; after pruning: 918


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:300)  293  0.00 0.00 0.00  BF484958Ld07P027G03P027G091F1_086.ab1        1   301 (193)  C BF484958Ld07P027G03P027G091R1_086.ab1   (149)   301     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C BF484958Ld07P027G03P027G091R1_086.ab1   450 
  273    BF484958Ld07P027G03P027G091F1_086.ab1   124 
  305  C BF484958Ld07P027G03P027G091R1_086.ab1   146 
  309    BF484958Ld07P027G03P027G091F1_086.ab1   160 
Contig length: old 643, new 643

Contig length: old 643, new 643
New start: 0