No. words: 1782; after pruning: 1716


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:290)  280  0.00 0.00 0.34  BF485381Ld01P081A02P081A081F1_055.ab1        1   291 (167)  C BF485381Ld01P081A02P081A081R1_055.ab1   (147)   290     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (2,1:3)  450  0.22 0.00 0.00  BF485381Ld01P081A02P081A081F1_055.ab1        4   458 (0)    BF485381Ld01P081A02P081A081F1_077.ab1        1   455 (1) *
Merge:(0)    0    0.0 9.1 (3,1:281)  416  0.23 0.00 0.00  BF485381Ld01P081A02P081A081R1_055.ab1       11   437 (0)    BF485381Ld01P081A02P081A081R1_077.ab1        2   428 (3) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  988 nodes

 296 str. conn. components

Path
    1  C BF485381Ld01P081A02P081A081R1_077.ab1   431 
   19  C BF485381Ld01P081A02P081A081R1_055.ab1   422 
   27  C BF485381Ld01P081A02P081A081R1_077.ab1   405 
  346    BF485381Ld01P081A02P081A081F1_055.ab1   196 
  461    BF485381Ld01P081A02P081A081F1_077.ab1   308 
  584    BF485381Ld01P081A02P081A081F1_055.ab1   434 
  592    BF485381Ld01P081A02P081A081F1_077.ab1   439 
Contig length: old 608, new 609

Contig length: old 609, new 609
New start: 0