No. words: 1787; after pruning: 1721


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 6.2 (1,1:278)  272  0.00 0.00 0.00  BF485381Ld02P081A02P081A081F1_053.ab1        1   279 (179)  C BF485381Ld02P081A02P081A081R1_053.ab1   (146)   279     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:286)  267  1.05 0.00 0.35  BF485381Ld02P081A02P081A081F1_075.ab1        1   287 (169)  C BF485381Ld02P081A02P081A081R1_075.ab1   (162)   286     1 *
Merge:(0)    0    0.0 4.5 (2,2:3)  444  0.66 0.00 0.00  BF485381Ld02P081A02P081A081F1_053.ab1        4   458 (0)    BF485381Ld02P081A02P081A081F1_075.ab1        1   455 (1) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       2 
  1       3 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  954 nodes

 271 str. conn. components

Path
    1  C BF485381Ld02P081A02P081A081R1_075.ab1   448 
   51  C BF485381Ld02P081A02P081A081R1_053.ab1   388 
  215    BF485381Ld02P081A02P081A081F1_075.ab1    53 
  224  C BF485381Ld02P081A02P081A081R1_075.ab1   225 
  248    BF485381Ld02P081A02P081A081F1_075.ab1    86 
  250  C BF485381Ld02P081A02P081A081R1_075.ab1   199 
  251  C BF485381Ld02P081A02P081A081R1_053.ab1   188 
  303    BF485381Ld02P081A02P081A081F1_075.ab1   141 
  308    BF485381Ld02P081A02P081A081F1_053.ab1   149 
  472    BF485381Ld02P081A02P081A081F1_075.ab1   310 
Contig length: old 617, new 618

Contig length: old 618, new 618
New start: 0