No. words: 942; after pruning: 916


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   20    0.0 0.4 (1,1:434)  315  1.44 0.29 0.29  BG262582Ld03P067H05P067H111F1_075.ab1        1   348 (20)  C BG262582Ld03P067H05P067H111R1_075.ab1   (139)   435    88 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
20       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C BG262582Ld03P067H05P067H111R1_075.ab1   574 
  147    BG262582Ld03P067H05P067H111F1_075.ab1     8 
  159  C BG262582Ld03P067H05P067H111R1_075.ab1   416 
  169    BG262582Ld03P067H05P067H111F1_075.ab1    29 
  185  C BG262582Ld03P067H05P067H111R1_075.ab1   390 
  193    BG262582Ld03P067H05P067H111F1_075.ab1    53 
  261  C BG262582Ld03P067H05P067H111R1_075.ab1   314 
  265    BG262582Ld03P067H05P067H111F1_075.ab1   125 
  425  C BG262582Ld03P067H05P067H111R1_075.ab1   150 
  437    BG262582Ld03P067H05P067H111F1_075.ab1   297 
  441  C BG262582Ld03P067H05P067H111R1_075.ab1   134 
Contig length: old 574, new 574

Contig length: old 574, new 574
New start: 0