No. words: 807; after pruning: 781


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.9 (1,1:373)  271  0.70 0.35 0.00  BG262582Ld05P067H05P067H111F1_071.ab1        1   287 (0)  C BG262582Ld05P067H05P067H111R1_071.ab1   (145)   375    88 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C BG262582Ld05P067H05P067H111R1_071.ab1   520 
  169    BG262582Ld05P067H05P067H111F1_071.ab1    23 
  177  C BG262582Ld05P067H05P067H111R1_071.ab1   344 
  193    BG262582Ld05P067H05P067H111F1_071.ab1    47 
  201  C BG262582Ld05P067H05P067H111R1_071.ab1   320 
  205    BG262582Ld05P067H05P067H111F1_071.ab1    59 
  209  C BG262582Ld05P067H05P067H111R1_071.ab1   312 
  213    BG262582Ld05P067H05P067H111F1_071.ab1    67 
  225  C BG262582Ld05P067H05P067H111R1_071.ab1   296 
  233    BG262582Ld05P067H05P067H111F1_071.ab1    87 
  241  C BG262582Ld05P067H05P067H111R1_071.ab1   280 
  253    BG262582Ld05P067H05P067H111F1_071.ab1   107 
  257  C BG262582Ld05P067H05P067H111R1_071.ab1   264 
  289    BG262582Ld05P067H05P067H111F1_071.ab1   143 
  399  C BG262582Ld05P067H05P067H111R1_071.ab1   122 
Contig length: old 520, new 520

Contig length: old 520, new 520
New start: 0