No. words: 982; after pruning: 956


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:315)  306  0.00 0.00 0.00  BG263667Ld06P027A04P027A101F1_074.ab1        1   316 (193)  C BG263667Ld06P027A04P027A101R1_074.ab1   (157)   316     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C BG263667Ld06P027A04P027A101R1_074.ab1   473 
  193    BG263667Ld06P027A04P027A101F1_074.ab1    36 
  197  C BG263667Ld06P027A04P027A101R1_074.ab1   277 
  205    BG263667Ld06P027A04P027A101F1_074.ab1    48 
  221  C BG263667Ld06P027A04P027A101R1_074.ab1   253 
  225    BG263667Ld06P027A04P027A101F1_074.ab1    68 
  237  C BG263667Ld06P027A04P027A101R1_074.ab1   237 
  245    BG263667Ld06P027A04P027A101F1_074.ab1    88 
  261  C BG263667Ld06P027A04P027A101R1_074.ab1   213 
  265    BG263667Ld06P027A04P027A101F1_074.ab1   108 
  269  C BG263667Ld06P027A04P027A101R1_074.ab1   205 
  277    BG263667Ld06P027A04P027A101F1_074.ab1   120 
  305  C BG263667Ld06P027A04P027A101R1_074.ab1   169 
  309    BG263667Ld06P027A04P027A101F1_074.ab1   152 
Contig length: old 666, new 666

Contig length: old 666, new 666
New start: 0