No. words: 996; after pruning: 970


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.7 (1,1:340)  322  0.00 0.30 0.00  BG263667Ld08P027A04P027A101F1_070.ab1        4   340 (174)  C BG263667Ld08P027A04P027A101R1_070.ab1   (144)   338     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C BG263667Ld08P027A04P027A101R1_070.ab1   482 
  196    BG263667Ld08P027A04P027A101F1_070.ab1    55 
  204  C BG263667Ld08P027A04P027A101R1_070.ab1   279 
  216    BG263667Ld08P027A04P027A101F1_070.ab1    75 
  240  C BG263667Ld08P027A04P027A101R1_070.ab1   243 
  244    BG263667Ld08P027A04P027A101F1_070.ab1   103 
  252  C BG263667Ld08P027A04P027A101R1_070.ab1   231 
  256    BG263667Ld08P027A04P027A101F1_070.ab1   115 
  260  C BG263667Ld08P027A04P027A101R1_070.ab1   223 
  272    BG263667Ld08P027A04P027A101F1_070.ab1   131 
  276  C BG263667Ld08P027A04P027A101R1_070.ab1   207 
  280    BG263667Ld08P027A04P027A101F1_070.ab1   139 
  292  C BG263667Ld08P027A04P027A101R1_070.ab1   191 
  300    BG263667Ld08P027A04P027A101F1_070.ab1   159 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0