No. words: 1806; after pruning: 1780


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.8 (1,1:882)  836  0.34 0.11 0.00  BG263754As01P114H03P114H061F1_004.ab1        3   883 (19)  C BG263754As01P114H03P114H061R1_004.ab1   (22)   882     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  428 nodes

 216 str. conn. components

Path
    1  C BG263754As01P114H03P114H061R1_004.ab1   904 
   35    BG263754As01P114H03P114H061F1_004.ab1    14 
   55  C BG263754As01P114H03P114H061R1_004.ab1   850 
   69    BG263754As01P114H03P114H061F1_004.ab1    48 
  625  C BG263754As01P114H03P114H061R1_004.ab1   280 
  901    BG263754As01P114H03P114H061F1_004.ab1   880 
Contig length: old 923, new 923

Contig length: old 923, new 923
New start: 0