No. words: 1618; after pruning: 1592


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   14    0.0 14.5 (1,1:751)  725  0.41 0.00 0.00  BG263754At02P114E03P114G061F1_041.ab1        3   738 (65)  C BG263754At02P114E03P114G061R1_041.ab1   (65)   750    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
14       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C BG263754At02P114E03P114G061R1_041.ab1   815 
   77    BG263754At02P114E03P114G061F1_041.ab1    14 
  217  C BG263754At02P114E03P114G061R1_041.ab1   599 
  737    BG263754At02P114E03P114G061F1_041.ab1   674 
  745  C BG263754At02P114E03P114G061R1_041.ab1    71 
  761    BG263754At02P114E03P114G061F1_041.ab1   698 
Contig length: old 866, new 866

Contig length: old 866, new 866
New start: 0