No. words: 1738; after pruning: 1712


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.3 (1,1:959)  778  0.00 0.00 0.00  BG263754Ld04P114D03P114G061F1_089.ab1       92   869 (0)  C BG263754Ld04P114D03P114G061R1_089.ab1   (0)   869    92 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1    BG263754Ld04P114D03P114G061F1_089.ab1     1 
  379  C BG263754Ld04P114D03P114G061R1_089.ab1   582 
  407    BG263754Ld04P114D03P114G061F1_089.ab1   407 
  515  C BG263754Ld04P114D03P114G061R1_089.ab1   446 
Contig length: old 960, new 960

Contig length: old 960, new 960
New start: 0