No. words: 1718; after pruning: 1692


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.4 (1,1:881)  770  0.25 0.12 0.00  BG263754Ld10P114H03P114H061F1_075.ab1        3   811 (0)  C BG263754Ld10P114H03P114H061R1_075.ab1   (26)   881    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1  C BG263754Ld10P114H03P114H061R1_075.ab1   907 
   39    BG263754Ld10P114H03P114H061F1_075.ab1    14 
  143  C BG263754Ld10P114H03P114H061R1_075.ab1   765 
  147    BG263754Ld10P114H03P114H061F1_075.ab1   122 
  259  C BG263754Ld10P114H03P114H061R1_075.ab1   649 
  539    BG263754Ld10P114H03P114H061F1_075.ab1   514 
  607  C BG263754Ld10P114H03P114H061R1_075.ab1   301 
  739    BG263754Ld10P114H03P114H061F1_075.ab1   714 
  743  C BG263754Ld10P114H03P114H061R1_075.ab1   165 
Contig length: old 907, new 907

Contig length: old 907, new 907
New start: 0