No. words: 1729; after pruning: 1703


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 17.1 (1,1:881)  775  0.12 0.24 0.12  BG263754Ld11P114H03P114H061F1_073.ab1        3   821 (0)  C BG263754Ld11P114H03P114H061R1_073.ab1   (28)   880    61 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1  C BG263754Ld11P114H03P114H061R1_073.ab1   908 
   41    BG263754Ld11P114H03P114H061F1_073.ab1    14 
  189  C BG263754Ld11P114H03P114H061R1_073.ab1   720 
  197    BG263754Ld11P114H03P114H061F1_073.ab1   170 
  257  C BG263754Ld11P114H03P114H061R1_073.ab1   652 
  541    BG263754Ld11P114H03P114H061F1_073.ab1   514 
  661  C BG263754Ld11P114H03P114H061R1_073.ab1   248 
Contig length: old 908, new 908

Contig length: old 908, new 908
New start: 0