No. words: 1713; after pruning: 1673


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:815)  808  0.12 0.00 0.12  BG263754Tu01P114E03P114G061F1_020.ab1        1   816 (38)  C BG263754Tu01P114E03P114G061R1_020.ab1   (44)   815     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BG263754Tu01P114E03P114G061R1_020.ab1   859 
   56    BG263754Tu01P114E03P114G061F1_020.ab1    12 
  136  C BG263754Tu01P114E03P114G061R1_020.ab1   724 
  144    BG263754Tu01P114E03P114G061F1_020.ab1   100 
  416  C BG263754Tu01P114E03P114G061R1_020.ab1   444 
  813    BG263754Tu01P114E03P114G061F1_020.ab1   769 
  817  C BG263754Tu01P114E03P114G061R1_020.ab1    43 
  841    BG263754Tu01P114E03P114G061F1_020.ab1   797 
Contig length: old 897, new 898

Contig length: old 898, new 898
New start: 0