No. words: 1775; after pruning: 1735


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:1219)  532  0.18 0.00 0.00  BG263754Tu01P114G03P114H061F1_039.ab1      312   866 (0)  C BG263754Tu01P114G03P114H061R1_039.ab1   (0)   909   355 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BG263754Tu01P114G03P114H061F1_039.ab1     1 
  667  C BG263754Tu01P114G03P114H061R1_039.ab1   554 
Contig length: old 1220, new 1220

Contig length: old 1220, new 1220
New start: 0