No. words: 1840; after pruning: 1800


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.9 (1,1:962)  861  0.11 0.23 0.11  BG263754Tu02P114D03P114G061F1_030.ab1       66   941 (0)  C BG263754Tu02P114D03P114G061R1_030.ab1   (0)   899    23 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  430 nodes

 217 str. conn. components

Path
    1    BG263754Tu02P114D03P114G061F1_030.ab1     1 
  370  C BG263754Tu02P114D03P114G061R1_030.ab1   595 
  386    BG263754Tu02P114D03P114G061F1_030.ab1   386 
  522  C BG263754Tu02P114D03P114G061R1_030.ab1   443 
  590    BG263754Tu02P114D03P114G061F1_030.ab1   590 
  626  C BG263754Tu02P114D03P114G061R1_030.ab1   339 
Contig length: old 963, new 964

Contig length: old 964, new 964
New start: 0