No. words: 1826; after pruning: 1800


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.5 (1,1:875)  832  0.23 0.23 0.00  BG263754Tu02P114H03P114H061F1_006.ab1        3   875 (41)  C BG263754Tu02P114H03P114H061R1_006.ab1   (35)   875     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  426 nodes

 215 str. conn. components

Path
    1  C BG263754Tu02P114H03P114H061R1_006.ab1   910 
   48    BG263754Tu02P114H03P114H061F1_006.ab1    14 
   64  C BG263754Tu02P114H03P114H061R1_006.ab1   847 
   68    BG263754Tu02P114H03P114H061F1_006.ab1    34 
  114  C BG263754Tu02P114H03P114H061R1_006.ab1   797 
  122    BG263754Tu02P114H03P114H061F1_006.ab1    88 
  618  C BG263754Tu02P114H03P114H061R1_006.ab1   293 
  898    BG263754Tu02P114H03P114H061F1_006.ab1   864 
Contig length: old 950, new 950

Contig length: old 950, new 951
New start: 0 
S Change at: 75; seg lengths: entry 4, contig 4
I Change at: 903; seg lengths: entry 1, contig 0