No. words: 1435; after pruning: 1409


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:677)  662  0.00 0.15 0.15  BG263758As02P081C02P081C081F1_059.ab1        1   678 (45)  C BG263758As02P081C02P081C081R1_059.ab1   (34)   678     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C BG263758As02P081C02P081C081R1_059.ab1   712 
   58    BG263758As02P081C02P081C081F1_059.ab1    23 
  462  C BG263758As02P081C02P081C081R1_059.ab1   251 
  614    BG263758As02P081C02P081C081F1_059.ab1   579 
  618  C BG263758As02P081C02P081C081R1_059.ab1    95 
  626    BG263758As02P081C02P081C081F1_059.ab1   591 
  630  C BG263758As02P081C02P081C081R1_059.ab1    83 
  702    BG263758As02P081C02P081C081F1_059.ab1   667 
Contig length: old 757, new 758

Contig length: old 758, new 758
New start: 0