No. words: 1200; after pruning: 1174


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:563)  555  0.00 0.00 0.00  BG263758At01P081C02P081C081F1_057.ab1        1   564 (29)  C BG263758At01P081C02P081C081R1_057.ab1   (43)   564     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BG263758At01P081C02P081C081R1_057.ab1   607 
   72    BG263758At01P081C02P081C081F1_057.ab1    29 
   84  C BG263758At01P081C02P081C081R1_057.ab1   524 
   96    BG263758At01P081C02P081C081F1_057.ab1    53 
  100  C BG263758At01P081C02P081C081R1_057.ab1   508 
  136    BG263758At01P081C02P081C081F1_057.ab1    93 
  140  C BG263758At01P081C02P081C081R1_057.ab1   468 
  148    BG263758At01P081C02P081C081F1_057.ab1   105 
  152  C BG263758At01P081C02P081C081R1_057.ab1   456 
  208    BG263758At01P081C02P081C081F1_057.ab1   165 
  212  C BG263758At01P081C02P081C081R1_057.ab1   396 
  228    BG263758At01P081C02P081C081F1_057.ab1   185 
  232  C BG263758At01P081C02P081C081R1_057.ab1   376 
  240    BG263758At01P081C02P081C081F1_057.ab1   197 
  256  C BG263758At01P081C02P081C081R1_057.ab1   352 
  260    BG263758At01P081C02P081C081F1_057.ab1   217 
  272  C BG263758At01P081C02P081C081R1_057.ab1   336 
  280    BG263758At01P081C02P081C081F1_057.ab1   237 
  284  C BG263758At01P081C02P081C081R1_057.ab1   324 
  324    BG263758At01P081C02P081C081F1_057.ab1   281 
  336  C BG263758At01P081C02P081C081R1_057.ab1   272 
  352    BG263758At01P081C02P081C081F1_057.ab1   309 
  356  C BG263758At01P081C02P081C081R1_057.ab1   252 
  412    BG263758At01P081C02P081C081F1_057.ab1   369 
  416  C BG263758At01P081C02P081C081R1_057.ab1   192 
  432    BG263758At01P081C02P081C081F1_057.ab1   389 
  440  C BG263758At01P081C02P081C081R1_057.ab1   168 
  444    BG263758At01P081C02P081C081F1_057.ab1   401 
  500  C BG263758At01P081C02P081C081R1_057.ab1   108 
  508    BG263758At01P081C02P081C081F1_057.ab1   465 
Contig length: old 636, new 636

Contig length: old 636, new 636
New start: 0