No. words: 1204; after pruning: 1178


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:569)  553  0.00 0.00 0.35  BG263758At02P081C02P081C081F1_055.ab1        1   571 (21)  C BG263758At02P081C02P081C081R1_055.ab1   (43)   569     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BG263758At02P081C02P081C081R1_055.ab1   612 
   68    BG263758At02P081C02P081C081F1_055.ab1    25 
   92  C BG263758At02P081C02P081C081R1_055.ab1   521 
  100    BG263758At02P081C02P081C081F1_055.ab1    57 
  124  C BG263758At02P081C02P081C081R1_055.ab1   489 
  128    BG263758At02P081C02P081C081F1_055.ab1    85 
  144  C BG263758At02P081C02P081C081R1_055.ab1   469 
  148    BG263758At02P081C02P081C081F1_055.ab1   105 
  152  C BG263758At02P081C02P081C081R1_055.ab1   461 
  160    BG263758At02P081C02P081C081F1_055.ab1   117 
  168  C BG263758At02P081C02P081C081R1_055.ab1   445 
  192    BG263758At02P081C02P081C081F1_055.ab1   149 
  204  C BG263758At02P081C02P081C081R1_055.ab1   409 
  224    BG263758At02P081C02P081C081F1_055.ab1   181 
  236  C BG263758At02P081C02P081C081R1_055.ab1   377 
  240    BG263758At02P081C02P081C081F1_055.ab1   197 
  256  C BG263758At02P081C02P081C081R1_055.ab1   357 
  260    BG263758At02P081C02P081C081F1_055.ab1   217 
  268  C BG263758At02P081C02P081C081R1_055.ab1   345 
  276    BG263758At02P081C02P081C081F1_055.ab1   233 
  288  C BG263758At02P081C02P081C081R1_055.ab1   325 
  352    BG263758At02P081C02P081C081F1_055.ab1   309 
  356  C BG263758At02P081C02P081C081R1_055.ab1   257 
  412    BG263758At02P081C02P081C081F1_055.ab1   369 
  416  C BG263758At02P081C02P081C081R1_055.ab1   197 
  440    BG263758At02P081C02P081C081F1_055.ab1   397 
  488  C BG263758At02P081C02P081C081R1_055.ab1   125 
  492    BG263758At02P081C02P081C081F1_055.ab1   449 
  500  C BG263758At02P081C02P081C081R1_055.ab1   113 
  508    BG263758At02P081C02P081C081F1_055.ab1   465 
  512  C BG263758At02P081C02P081C081R1_055.ab1   101 
  524    BG263758At02P081C02P081C081F1_055.ab1   481 
  540  C BG263758At02P081C02P081C081R1_055.ab1    73 
  544    BG263758At02P081C02P081C081F1_055.ab1   501 
  556  C BG263758At02P081C02P081C081R1_055.ab1    57 
  572    BG263758At02P081C02P081C081F1_055.ab1   529 
Contig length: old 634, new 635

Contig length: old 635, new 635
New start: 0