No. words: 1277; after pruning: 1251


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:475)  472  0.00 0.00 0.00  BG263758Ld04P081C02P081C081F1_079.ab1        1   476 (179)  C BG263758Ld04P081C02P081C081R1_079.ab1   (146)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BG263758Ld04P081C02P081C081R1_079.ab1   622 
  495    BG263758Ld04P081C02P081C081F1_079.ab1   349 
Contig length: old 801, new 801

Contig length: old 801, new 801
New start: 0