No. words: 539; after pruning: 513


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.7 (1,1:217)  195  1.38 0.46 0.46  BG263758Td03P081C02P108G091F1_013.ab1        1   218 (53)  C BG263758Td03P081C02P108G091R1_013.ab1   (50)   218     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1  C BG263758Td03P081C02P108G091R1_013.ab1   268 
  160    BG263758Td03P081C02P108G091F1_013.ab1   109 
  237  C BG263758Td03P081C02P108G091R1_013.ab1    32 
  241    BG263758Td03P081C02P108G091F1_013.ab1   190 
  245  C BG263758Td03P081C02P108G091R1_013.ab1    24 
  249    BG263758Td03P081C02P108G091F1_013.ab1   198 
Contig length: old 321, new 322

Contig length: old 322, new 322
New start: 0