No. words: 1050; after pruning: 1024


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:477)  455  0.00 0.00 0.21  BG263769As01P081D02P081D081F1_049.ab1        1   478 (48)  C BG263769As01P081D02P081D081R1_049.ab1   (47)   477     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BG263769As01P081D02P081D081R1_049.ab1   524 
   59    BG263769As01P081D02P081D081F1_049.ab1    12 
  171  C BG263769As01P081D02P081D081R1_049.ab1   354 
  259    BG263769As01P081D02P081D081F1_049.ab1   212 
  263  C BG263769As01P081D02P081D081R1_049.ab1   262 
  459    BG263769As01P081D02P081D081F1_049.ab1   412 
  463  C BG263769As01P081D02P081D081R1_049.ab1    62 
  467    BG263769As01P081D02P081D081F1_049.ab1   420 
  483  C BG263769As01P081D02P081D081R1_049.ab1    42 
  487    BG263769As01P081D02P081D081F1_049.ab1   440 
  495  C BG263769As01P081D02P081D081R1_049.ab1    30 
  503    BG263769As01P081D02P081D081F1_049.ab1   456 
Contig length: old 572, new 573

Contig length: old 573, new 573
New start: 0