No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:374)  352  0.27 0.27 0.27  BG263769Ld02P081D02P081D081F1_006.ab1        1   375 (174)  C BG263769Ld02P081D02P081D081R1_006.ab1   (147)   375     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BG263769Ld02P081D02P081D081R1_006.ab1   522 
  258    BG263769Ld02P081D02P081D081F1_006.ab1   110 
  270  C BG263769Ld02P081D02P081D081R1_006.ab1   253 
  278    BG263769Ld02P081D02P081D081F1_006.ab1   130 
  282  C BG263769Ld02P081D02P081D081R1_006.ab1   241 
  310    BG263769Ld02P081D02P081D081F1_006.ab1   162 
Contig length: old 696, new 697

Contig length: old 697, new 697
New start: 0