No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:362)  349  0.28 0.00 0.00  BG263769Ld04P081D02P081D081F1_002.ab1        1   363 (186)  C BG263769Ld04P081D02P081D081R1_002.ab1   (156)   363     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BG263769Ld04P081D02P081D081R1_002.ab1   519 
  240    BG263769Ld04P081D02P081D081F1_002.ab1    84 
  244  C BG263769Ld04P081D02P081D081R1_002.ab1   276 
  252    BG263769Ld04P081D02P081D081F1_002.ab1    96 
  296  C BG263769Ld04P081D02P081D081R1_002.ab1   224 
  304    BG263769Ld04P081D02P081D081F1_002.ab1   148 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0