No. words: 1045; after pruning: 1019


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.2 (1,1:351)  323  0.85 0.57 0.00  BG263769Ld05P081D02P081D081F1_031.ab1        1   351 (183)  C BG263769Ld05P081D02P081D081R1_031.ab1   (158)   353     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C BG263769Ld05P081D02P081D081R1_031.ab1   511 
  260    BG263769Ld05P081D02P081D081F1_031.ab1   100 
  264  C BG263769Ld05P081D02P081D081R1_031.ab1   248 
  280    BG263769Ld05P081D02P081D081F1_031.ab1   120 
  296  C BG263769Ld05P081D02P081D081R1_031.ab1   216 
  308    BG263769Ld05P081D02P081D081F1_031.ab1   148 
Contig length: old 693, new 694

Contig length: old 694, new 694
New start: 0