No. words: 1075; after pruning: 1049


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.9 (1,1:381)  358  0.00 0.00 0.78  BG263769Ld07P081D02P081D081F1_075.ab1        1   384 (162)  C BG263769Ld07P081D02P081D081R1_075.ab1   (148)   381     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BG263769Ld07P081D02P081D081R1_075.ab1   529 
  196    BG263769Ld07P081D02P081D081F1_075.ab1    48 
  200  C BG263769Ld07P081D02P081D081R1_075.ab1   330 
  216    BG263769Ld07P081D02P081D081F1_075.ab1    68 
  220  C BG263769Ld07P081D02P081D081R1_075.ab1   310 
  224    BG263769Ld07P081D02P081D081F1_075.ab1    76 
  236  C BG263769Ld07P081D02P081D081R1_075.ab1   294 
  240    BG263769Ld07P081D02P081D081F1_075.ab1    92 
  248  C BG263769Ld07P081D02P081D081R1_075.ab1   282 
  260    BG263769Ld07P081D02P081D081F1_075.ab1   112 
  268  C BG263769Ld07P081D02P081D081R1_075.ab1   262 
  276    BG263769Ld07P081D02P081D081F1_075.ab1   128 
  284  C BG263769Ld07P081D02P081D081R1_075.ab1   246 
  296    BG263769Ld07P081D02P081D081F1_075.ab1   148 
  300  C BG263769Ld07P081D02P081D081R1_075.ab1   230 
  304    BG263769Ld07P081D02P081D081F1_075.ab1   156 
  384  C BG263769Ld07P081D02P081D081R1_075.ab1   146 
  392    BG263769Ld07P081D02P081D081F1_075.ab1   244 
  476  C BG263769Ld07P081D02P081D081R1_075.ab1    54 
  480    BG263769Ld07P081D02P081D081F1_075.ab1   332 
Contig length: old 693, new 694

Contig length: old 694, new 694
New start: 0