No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:362)  352  0.00 0.00 0.00  BG263769Ld11P081D02P081D081F1_067.ab1        1   363 (175)  C BG263769Ld11P081D02P081D081R1_067.ab1   (158)   363     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BG263769Ld11P081D02P081D081R1_067.ab1   521 
  198    BG263769Ld11P081D02P081D081F1_067.ab1    40 
  202  C BG263769Ld11P081D02P081D081R1_067.ab1   320 
  242    BG263769Ld11P081D02P081D081F1_067.ab1    84 
  246  C BG263769Ld11P081D02P081D081R1_067.ab1   276 
  254    BG263769Ld11P081D02P081D081F1_067.ab1    96 
  302  C BG263769Ld11P081D02P081D081R1_067.ab1   220 
  306    BG263769Ld11P081D02P081D081F1_067.ab1   148 
  366  C BG263769Ld11P081D02P081D081R1_067.ab1   156 
  370    BG263769Ld11P081D02P081D081F1_067.ab1   212 
  446  C BG263769Ld11P081D02P081D081R1_067.ab1    76 
  454    BG263769Ld11P081D02P081D081F1_067.ab1   296 
Contig length: old 696, new 696

Contig length: old 696, new 696
New start: 0