No. words: 666; after pruning: 640


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.5 (1,1:235)  189  5.11 0.43 0.00  BG263769Sn29P108C10P081D081F1_090.ab1        1   235 (113)  C BG263769Sn29P108C10P081D081R1_090.ab1   (82)   236     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  92 nodes

 48 str. conn. components

Path
    1  C BG263769Sn29P108C10P081D081R1_090.ab1   318 
  266    BG263769Sn29P108C10P081D081F1_090.ab1   184 
Contig length: old 430, new 430

Contig length: old 430, new 431
New start: 0 
I Change at: 284; seg lengths: entry 4, contig 3