No. words: 632; after pruning: 606


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.7 -1.7 (1,1:207)  122 12.98 0.00 0.00  BG263769Td02P115H03P081D081F1_080.ab1        1   208 (60)  C BG263769Td02P115H03P081D081R1_080.ab1   (156)   208     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.7       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1  C BG263769Td02P115H03P081D081R1_080.ab1   364 
  182    BG263769Td02P115H03P081D081F1_080.ab1    26 
  186  C BG263769Td02P115H03P081D081R1_080.ab1   179 
  190    BG263769Td02P115H03P081D081F1_080.ab1    34 
  194  C BG263769Td02P115H03P081D081R1_080.ab1   171 
  247    BG263769Td02P115H03P081D081F1_080.ab1    91 
  286  C BG263769Td02P115H03P081D081R1_080.ab1    79 
  351    BG263769Td02P115H03P081D081F1_080.ab1   195 
Contig length: old 424, new 424

Contig length: old 424, new 424
New start: 0 
S Change at: 171; seg lengths: entry 1, contig 1
S Change at: 203; seg lengths: entry 1, contig 1
S Change at: 225; seg lengths: entry 3, contig 3