No. words: 621; after pruning: 595


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Rjct: (2)   13   -5.9 -5.9 (1,1:205)   63 22.28 0.00 0.00  BG263769Td08P115H03P081D081F1_074.ab1       14   206 (55)  C BG263769Td08P115H03P081D081R1_074.ab1   (167)   193     1 *
  Worst pair: offset 0 
LLR breakdown: discreps: -8.4 (<20 part: -8.4 (#=43), >20:0.0 (#=0); in HQ: -8.4, out HQ 0.0), match: 3.3  lead: -0.9  total: -6.0   63 22.28 0.00 0.00  BG263769Td08P115H03P081D081F1_074.ab1       14   206 (55)  C BG263769Td08P115H03P081D081R1_074.ab1   (167)   193     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-5.9       0        1

Gap   # merges  # failures
 size
13       0        1

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 2:  2 nodes

 2 str. conn. components

Path
    1    BG263769Td08P115H03P081D081R1_074.ab1     1 
Contig length: old 360, new 360

Contig 1:  2 nodes

 2 str. conn. components

Path
    1    BG263769Td08P115H03P081D081F1_074.ab1     1 
Contig length: old 261, new 261