No. words: 1081; after pruning: 1055


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:488)  475  0.00 0.00 0.20  BG263780At01P081E02P081E081F1_050.ab1        1   489 (55)  C BG263780At01P081E02P081E081R1_050.ab1   (49)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BG263780At01P081E02P081E081R1_050.ab1   537 
   61    BG263780At01P081E02P081E081F1_050.ab1    12 
   65  C BG263780At01P081E02P081E081R1_050.ab1   473 
   77    BG263780At01P081E02P081E081F1_050.ab1    28 
   93  C BG263780At01P081E02P081E081R1_050.ab1   445 
  141    BG263780At01P081E02P081E081F1_050.ab1    92 
  185  C BG263780At01P081E02P081E081R1_050.ab1   353 
  257    BG263780At01P081E02P081E081F1_050.ab1   208 
Contig length: old 592, new 593

Contig length: old 593, new 593
New start: 0