No. words: 1339; after pruning: 1313


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.7 (1,1:518)  495  0.00 0.19 0.39  BG263780Ld06P081E02P081E081F1_088.ab1        2   520 (136)  C BG263780Ld06P081E02P081E081R1_088.ab1   (165)   518     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BG263780Ld06P081E02P081E081R1_088.ab1   683 
  252    BG263780Ld06P081E02P081E081F1_088.ab1    87 
  260  C BG263780Ld06P081E02P081E081R1_088.ab1   424 
  284    BG263780Ld06P081E02P081E081F1_088.ab1   119 
  312  C BG263780Ld06P081E02P081E081R1_088.ab1   372 
  348    BG263780Ld06P081E02P081E081F1_088.ab1   183 
Contig length: old 820, new 821

Contig length: old 821, new 821
New start: 0