No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:509)  491  0.00 0.00 0.39  BG263780Ld07P081E02P081E081F1_086.ab1        1   511 (126)  C BG263780Ld07P081E02P081E081R1_086.ab1   (144)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BG263780Ld07P081E02P081E081R1_086.ab1   653 
  164    BG263780Ld07P081E02P081E081F1_086.ab1    20 
  172  C BG263780Ld07P081E02P081E081R1_086.ab1   482 
  320    BG263780Ld07P081E02P081E081F1_086.ab1   176 
  544  C BG263780Ld07P081E02P081E081R1_086.ab1   110 
  564    BG263780Ld07P081E02P081E081F1_086.ab1   420 
Contig length: old 780, new 781

Contig length: old 781, new 781
New start: 0