No. words: 1326; after pruning: 1300


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:501)  483  0.00 0.00 0.40  BG263780Ld11P081E02P081E081F1_037.ab1        1   503 (144)  C BG263780Ld11P081E02P081E081R1_037.ab1   (178)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BG263780Ld11P081E02P081E081R1_037.ab1   679 
  390    BG263780Ld11P081E02P081E081F1_037.ab1   212 
Contig length: old 824, new 825

Contig length: old 825, new 825
New start: 0