No. words: 1098; after pruning: 1072


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.5 (1,1:502)  479  0.20 0.00 0.40  BG263780Tu01P081E02P081E081F1_058.ab1        1   501 (47)  C BG263780Tu01P081E02P081E081R1_058.ab1   (48)   502     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BG263780Tu01P081E02P081E081R1_058.ab1   550 
   80    BG263780Tu01P081E02P081E081F1_058.ab1    32 
   84  C BG263780Tu01P081E02P081E081R1_058.ab1   467 
  116    BG263780Tu01P081E02P081E081F1_058.ab1    68 
  124  C BG263780Tu01P081E02P081E081R1_058.ab1   427 
  140    BG263780Tu01P081E02P081E081F1_058.ab1    92 
  188  C BG263780Tu01P081E02P081E081R1_058.ab1   363 
  200    BG263780Tu01P081E02P081E081F1_058.ab1   152 
Contig length: old 595, new 596

Contig length: old 596, new 596
New start: 0