No. words: 1170; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.1 (1,1:538)  497  1.30 0.19 0.19  BG274119As01P129E06P129F121F1_057.ab1        2   539 (48)  C BG274119As01P129E06P129F121R1_057.ab1   (45)   538     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BG274119As01P129E06P129F121R1_057.ab1   583 
  204    BG274119As01P129E06P129F121F1_057.ab1   159 
Contig length: old 631, new 632

Contig length: old 632, new 632
New start: 0 
S Change at: 568; seg lengths: entry 1, contig 1