No. words: 1392; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.0 (1,1:539)  526  0.00 0.00 0.00  BG274119Ld06P129E06P129F121F1_077.ab1        6   540 (147)  C BG274119Ld06P129E06P129F121R1_077.ab1   (170)   535     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1  C BG274119Ld06P129E06P129F121R1_077.ab1   705 
  262    BG274119Ld06P129E06P129F121F1_077.ab1    97 
  518  C BG274119Ld06P129E06P129F121R1_077.ab1   188 
  558    BG274119Ld06P129E06P129F121F1_077.ab1   393 
  582  C BG274119Ld06P129E06P129F121R1_077.ab1   124 
  598    BG274119Ld06P129E06P129F121F1_077.ab1   433 
  602  C BG274119Ld06P129E06P129F121R1_077.ab1   104 
  614    BG274119Ld06P129E06P129F121F1_077.ab1   449 
Contig length: old 852, new 852

Contig length: old 852, new 852
New start: 0