No. words: 1379; after pruning: 1353


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:519)  507  0.00 0.19 0.00  BG274119Ld07P129E06P129F121F1_075.ab1        1   520 (149)  C BG274119Ld07P129E06P129F121R1_075.ab1   (189)   521     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BG274119Ld07P129E06P129F121R1_075.ab1   710 
  315    BG274119Ld07P129E06P129F121F1_075.ab1   125 
  319  C BG274119Ld07P129E06P129F121R1_075.ab1   392 
  323    BG274119Ld07P129E06P129F121F1_075.ab1   133 
  343  C BG274119Ld07P129E06P129F121R1_075.ab1   368 
  375    BG274119Ld07P129E06P129F121F1_075.ab1   185 
  387  C BG274119Ld07P129E06P129F121R1_075.ab1   324 
  515    BG274119Ld07P129E06P129F121F1_075.ab1   325 
  519  C BG274119Ld07P129E06P129F121R1_075.ab1   192 
  535    BG274119Ld07P129E06P129F121F1_075.ab1   345 
  599  C BG274119Ld07P129E06P129F121R1_075.ab1   112 
  611    BG274119Ld07P129E06P129F121F1_075.ab1   421 
Contig length: old 859, new 859

Contig length: old 859, new 859
New start: 0