No. words: 1168; after pruning: 1142


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 9.0 (1,1:538)  509  0.19 0.19 0.19  BG274119Tu01P129E06P129F121F1_061.ab1       10   539 (52)  C BG274119Tu01P129E06P129F121R1_061.ab1   (47)   530     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BG274119Tu01P129E06P129F121R1_061.ab1   577 
  206    BG274119Tu01P129E06P129F121F1_061.ab1   167 
Contig length: old 629, new 630

Contig length: old 630, new 630
New start: 0