No. words: 1150; after pruning: 1124


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:519)  485  1.35 0.19 0.00  BG274119Tu02P129E06P129F121F1_059.ab1        1   520 (59)  C BG274119Tu02P129E06P129F121R1_059.ab1   (50)   521     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BG274119Tu02P129E06P129F121R1_059.ab1   571 
   94    BG274119Tu02P129E06P129F121F1_059.ab1    43 
   98  C BG274119Tu02P129E06P129F121R1_059.ab1   474 
  154    BG274119Tu02P129E06P129F121F1_059.ab1   103 
Contig length: old 630, new 630

Contig length: old 630, new 630
New start: 0