No. words: 908; after pruning: 882


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:291)  277  0.00 0.34 0.34  BG274146Ld08P081F02P081F081F1_030.ab1        1   292 (175)  C BG274146Ld08P081F02P081F081R1_030.ab1   (149)   292     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BG274146Ld08P081F02P081F081R1_030.ab1   441 
  207    BG274146Ld08P081F02P081F081F1_030.ab1    57 
  211  C BG274146Ld08P081F02P081F081R1_030.ab1   231 
  275    BG274146Ld08P081F02P081F081F1_030.ab1   125 
  291  C BG274146Ld08P081F02P081F081R1_030.ab1   151 
  355    BG274146Ld08P081F02P081F081F1_030.ab1   205 
Contig length: old 616, new 617

Contig length: old 617, new 617
New start: 0