No. words: 1789; after pruning: 1763


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:759)  754  0.00 0.00 0.13  BG274485Ld03P027B04P027B101F1_008.ab1        1   760 (145)  C BG274485Ld03P027B04P027B101R1_008.ab1   (125)   759     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  378 nodes

 191 str. conn. components

Path
    1  C BG274485Ld03P027B04P027B101R1_008.ab1   884 
  137    BG274485Ld03P027B04P027B101F1_008.ab1    12 
  141  C BG274485Ld03P027B04P027B101R1_008.ab1   744 
  161    BG274485Ld03P027B04P027B101F1_008.ab1    36 
  189  C BG274485Ld03P027B04P027B101R1_008.ab1   696 
  201    BG274485Ld03P027B04P027B101F1_008.ab1    76 
  693  C BG274485Ld03P027B04P027B101R1_008.ab1   192 
  793    BG274485Ld03P027B04P027B101F1_008.ab1   668 
  801  C BG274485Ld03P027B04P027B101R1_008.ab1    84 
  861    BG274485Ld03P027B04P027B101F1_008.ab1   736 
  865  C BG274485Ld03P027B04P027B101R1_008.ab1    20 
  869    BG274485Ld03P027B04P027B101F1_008.ab1   744 
Contig length: old 1029, new 1030

Contig length: old 1030, new 1030
New start: 0