No. words: 1771; after pruning: 1745


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:759)  755  0.00 0.00 0.13  BG274485Ld06P027B04P027B101F1_002.ab1        1   760 (111)  C BG274485Ld06P027B04P027B101R1_002.ab1   (141)   759     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1  C BG274485Ld06P027B04P027B101R1_002.ab1   900 
  217    BG274485Ld06P027B04P027B101F1_002.ab1    77 
  225  C BG274485Ld06P027B04P027B101R1_002.ab1   676 
  229    BG274485Ld06P027B04P027B101F1_002.ab1    89 
  245  C BG274485Ld06P027B04P027B101R1_002.ab1   656 
  257    BG274485Ld06P027B04P027B101F1_002.ab1   117 
  261  C BG274485Ld06P027B04P027B101R1_002.ab1   640 
  265    BG274485Ld06P027B04P027B101F1_002.ab1   125 
  325  C BG274485Ld06P027B04P027B101R1_002.ab1   576 
  805    BG274485Ld06P027B04P027B101F1_002.ab1   665 
  813  C BG274485Ld06P027B04P027B101R1_002.ab1    88 
  853    BG274485Ld06P027B04P027B101F1_002.ab1   713 
  865  C BG274485Ld06P027B04P027B101R1_002.ab1    36 
  885    BG274485Ld06P027B04P027B101F1_002.ab1   745 
Contig length: old 1011, new 1011

Contig length: old 1011, new 1011
New start: 0