No. words: 1781; after pruning: 1755


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:758)  753  0.00 0.00 0.13  BG274485Ld07P027B04P027B101F1_031.ab1        1   759 (138)  C BG274485Ld07P027B04P027B101R1_031.ab1   (126)   758     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  378 nodes

 191 str. conn. components

Path
    1  C BG274485Ld07P027B04P027B101R1_031.ab1   884 
  150    BG274485Ld07P027B04P027B101F1_031.ab1    24 
  154  C BG274485Ld07P027B04P027B101R1_031.ab1   731 
  162    BG274485Ld07P027B04P027B101F1_031.ab1    36 
  174  C BG274485Ld07P027B04P027B101R1_031.ab1   711 
  178    BG274485Ld07P027B04P027B101F1_031.ab1    52 
  190  C BG274485Ld07P027B04P027B101R1_031.ab1   695 
  194    BG274485Ld07P027B04P027B101F1_031.ab1    68 
  270  C BG274485Ld07P027B04P027B101R1_031.ab1   615 
  298    BG274485Ld07P027B04P027B101F1_031.ab1   172 
  318  C BG274485Ld07P027B04P027B101R1_031.ab1   567 
  582    BG274485Ld07P027B04P027B101F1_031.ab1   456 
  666  C BG274485Ld07P027B04P027B101R1_031.ab1   219 
  738    BG274485Ld07P027B04P027B101F1_031.ab1   612 
  754  C BG274485Ld07P027B04P027B101R1_031.ab1   131 
  790    BG274485Ld07P027B04P027B101F1_031.ab1   664 
  798  C BG274485Ld07P027B04P027B101R1_031.ab1    87 
  830    BG274485Ld07P027B04P027B101F1_031.ab1   704 
  834  C BG274485Ld07P027B04P027B101R1_031.ab1    51 
  870    BG274485Ld07P027B04P027B101F1_031.ab1   744 
Contig length: old 1022, new 1023

Contig length: old 1023, new 1023
New start: 0