No. words: 1031; after pruning: 1005


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:728)  253  0.38 0.00 0.00  BG274556As01P027C04P027C101F1_011.ab1        1   266 (0)  C BG274556As01P027C04P027C101R1_011.ab1   (36)   729   464 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C BG274556As01P027C04P027C101R1_011.ab1   765 
   52    BG274556As01P027C04P027C101F1_011.ab1    16 
   56  C BG274556As01P027C04P027C101R1_011.ab1   710 
   64    BG274556As01P027C04P027C101F1_011.ab1    28 
  120  C BG274556As01P027C04P027C101R1_011.ab1   646 
  132    BG274556As01P027C04P027C101F1_011.ab1    96 
  140  C BG274556As01P027C04P027C101R1_011.ab1   626 
  152    BG274556As01P027C04P027C101F1_011.ab1   116 
  156  C BG274556As01P027C04P027C101R1_011.ab1   610 
  176    BG274556As01P027C04P027C101F1_011.ab1   140 
  180  C BG274556As01P027C04P027C101R1_011.ab1   586 
Contig length: old 765, new 765

Contig length: old 765, new 765
New start: 0