No. words: 1273; after pruning: 1247


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:593)  561  0.17 0.17 0.17  BG274556Sn25P052D11P027C101F1_087.ab1        1   594 (38)  C BG274556Sn25P052D11P027C101R1_087.ab1   (47)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BG274556Sn25P052D11P027C101R1_087.ab1   641 
   60    BG274556Sn25P052D11P027C101F1_087.ab1    12 
   72  C BG274556Sn25P052D11P027C101R1_087.ab1   570 
   80    BG274556Sn25P052D11P027C101F1_087.ab1    32 
   92  C BG274556Sn25P052D11P027C101R1_087.ab1   550 
  104    BG274556Sn25P052D11P027C101F1_087.ab1    56 
  120  C BG274556Sn25P052D11P027C101R1_087.ab1   522 
  124    BG274556Sn25P052D11P027C101F1_087.ab1    76 
  132  C BG274556Sn25P052D11P027C101R1_087.ab1   510 
  140    BG274556Sn25P052D11P027C101F1_087.ab1    92 
  144  C BG274556Sn25P052D11P027C101R1_087.ab1   498 
  160    BG274556Sn25P052D11P027C101F1_087.ab1   112 
  188  C BG274556Sn25P052D11P027C101R1_087.ab1   454 
  196    BG274556Sn25P052D11P027C101F1_087.ab1   148 
  220  C BG274556Sn25P052D11P027C101R1_087.ab1   422 
  248    BG274556Sn25P052D11P027C101F1_087.ab1   200 
  252  C BG274556Sn25P052D11P027C101R1_087.ab1   390 
  256    BG274556Sn25P052D11P027C101F1_087.ab1   208 
  268  C BG274556Sn25P052D11P027C101R1_087.ab1   374 
  276    BG274556Sn25P052D11P027C101F1_087.ab1   228 
  280  C BG274556Sn25P052D11P027C101R1_087.ab1   362 
  288    BG274556Sn25P052D11P027C101F1_087.ab1   240 
  344  C BG274556Sn25P052D11P027C101R1_087.ab1   298 
  352    BG274556Sn25P052D11P027C101F1_087.ab1   304 
  360  C BG274556Sn25P052D11P027C101R1_087.ab1   282 
  376    BG274556Sn25P052D11P027C101F1_087.ab1   328 
  436  C BG274556Sn25P052D11P027C101R1_087.ab1   206 
  448    BG274556Sn25P052D11P027C101F1_087.ab1   400 
  464  C BG274556Sn25P052D11P027C101R1_087.ab1   178 
  468    BG274556Sn25P052D11P027C101F1_087.ab1   420 
  476  C BG274556Sn25P052D11P027C101R1_087.ab1   166 
  480    BG274556Sn25P052D11P027C101F1_087.ab1   432 
  488  C BG274556Sn25P052D11P027C101R1_087.ab1   154 
  492    BG274556Sn25P052D11P027C101F1_087.ab1   444 
  500  C BG274556Sn25P052D11P027C101R1_087.ab1   142 
  512    BG274556Sn25P052D11P027C101F1_087.ab1   464 
  528  C BG274556Sn25P052D11P027C101R1_087.ab1   114 
  544    BG274556Sn25P052D11P027C101F1_087.ab1   496 
  598  C BG274556Sn25P052D11P027C101R1_087.ab1    44 
  606    BG274556Sn25P052D11P027C101F1_087.ab1   558 
Contig length: old 679, new 680

Contig length: old 680, new 680
New start: 0