No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.4 (1,1:594)  546  0.51 0.51 0.17  BG274556Sn27P052D11P027C101F1_085.ab1        1   593 (39)  C BG274556Sn27P052D11P027C101R1_085.ab1   (44)   596     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BG274556Sn27P052D11P027C101R1_085.ab1   640 
   62    BG274556Sn27P052D11P027C101F1_085.ab1    16 
   86  C BG274556Sn27P052D11P027C101R1_085.ab1   555 
   90    BG274556Sn27P052D11P027C101F1_085.ab1    44 
   98  C BG274556Sn27P052D11P027C101R1_085.ab1   543 
  102    BG274556Sn27P052D11P027C101F1_085.ab1    56 
  142  C BG274556Sn27P052D11P027C101R1_085.ab1   499 
  146    BG274556Sn27P052D11P027C101F1_085.ab1   100 
  218  C BG274556Sn27P052D11P027C101R1_085.ab1   423 
  230    BG274556Sn27P052D11P027C101F1_085.ab1   184 
  238  C BG274556Sn27P052D11P027C101R1_085.ab1   403 
  242    BG274556Sn27P052D11P027C101F1_085.ab1   196 
  250  C BG274556Sn27P052D11P027C101R1_085.ab1   391 
  254    BG274556Sn27P052D11P027C101F1_085.ab1   208 
  274  C BG274556Sn27P052D11P027C101R1_085.ab1   367 
  278    BG274556Sn27P052D11P027C101F1_085.ab1   232 
  302  C BG274556Sn27P052D11P027C101R1_085.ab1   339 
  306    BG274556Sn27P052D11P027C101F1_085.ab1   260 
  342  C BG274556Sn27P052D11P027C101R1_085.ab1   299 
  350    BG274556Sn27P052D11P027C101F1_085.ab1   304 
  358  C BG274556Sn27P052D11P027C101R1_085.ab1   283 
  374    BG274556Sn27P052D11P027C101F1_085.ab1   328 
  394  C BG274556Sn27P052D11P027C101R1_085.ab1   247 
  398    BG274556Sn27P052D11P027C101F1_085.ab1   352 
  402  C BG274556Sn27P052D11P027C101R1_085.ab1   239 
  406    BG274556Sn27P052D11P027C101F1_085.ab1   360 
  434  C BG274556Sn27P052D11P027C101R1_085.ab1   207 
  442    BG274556Sn27P052D11P027C101F1_085.ab1   396 
  450  C BG274556Sn27P052D11P027C101R1_085.ab1   191 
  454    BG274556Sn27P052D11P027C101F1_085.ab1   408 
  462  C BG274556Sn27P052D11P027C101R1_085.ab1   179 
  466    BG274556Sn27P052D11P027C101F1_085.ab1   420 
  470  C BG274556Sn27P052D11P027C101R1_085.ab1   171 
  478    BG274556Sn27P052D11P027C101F1_085.ab1   432 
  486  C BG274556Sn27P052D11P027C101R1_085.ab1   155 
  490    BG274556Sn27P052D11P027C101F1_085.ab1   444 
  498  C BG274556Sn27P052D11P027C101R1_085.ab1   143 
  510    BG274556Sn27P052D11P027C101F1_085.ab1   464 
  518  C BG274556Sn27P052D11P027C101R1_085.ab1   123 
  542    BG274556Sn27P052D11P027C101F1_085.ab1   496 
  550  C BG274556Sn27P052D11P027C101R1_085.ab1    91 
  558    BG274556Sn27P052D11P027C101F1_085.ab1   512 
  595  C BG274556Sn27P052D11P027C101R1_085.ab1    45 
  603    BG274556Sn27P052D11P027C101F1_085.ab1   557 
  607  C BG274556Sn27P052D11P027C101R1_085.ab1    33 
  611    BG274556Sn27P052D11P027C101F1_085.ab1   565 
  629  C BG274556Sn27P052D11P027C101R1_085.ab1    12 
  633    BG274556Sn27P052D11P027C101F1_085.ab1   587 
Contig length: old 677, new 678

Contig length: old 678, new 678
New start: 0