No. words: 1202; after pruning: 1176


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:522)  503  0.19 0.00 0.00  BG274556Sn29P052D11P027C101F1_083.ab1        1   523 (97)  C BG274556Sn29P052D11P027C101R1_083.ab1   (59)   523     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1  C BG274556Sn29P052D11P027C101R1_083.ab1   582 
   63    BG274556Sn29P052D11P027C101F1_083.ab1     4 
   71  C BG274556Sn29P052D11P027C101R1_083.ab1   512 
   75    BG274556Sn29P052D11P027C101F1_083.ab1    16 
   99  C BG274556Sn29P052D11P027C101R1_083.ab1   484 
  103    BG274556Sn29P052D11P027C101F1_083.ab1    44 
  131  C BG274556Sn29P052D11P027C101R1_083.ab1   452 
  135    BG274556Sn29P052D11P027C101F1_083.ab1    76 
  219  C BG274556Sn29P052D11P027C101R1_083.ab1   364 
  227    BG274556Sn29P052D11P027C101F1_083.ab1   168 
  231  C BG274556Sn29P052D11P027C101R1_083.ab1   352 
  235    BG274556Sn29P052D11P027C101F1_083.ab1   176 
  251  C BG274556Sn29P052D11P027C101R1_083.ab1   332 
  255    BG274556Sn29P052D11P027C101F1_083.ab1   196 
  363  C BG274556Sn29P052D11P027C101R1_083.ab1   220 
  371    BG274556Sn29P052D11P027C101F1_083.ab1   312 
  487  C BG274556Sn29P052D11P027C101R1_083.ab1    96 
  491    BG274556Sn29P052D11P027C101F1_083.ab1   432 
Contig length: old 679, new 679

Contig length: old 679, new 679
New start: 0