No. words: 892; after pruning: 866


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.5 (1,1:391)  373  0.00 0.00 0.00  BG274556Ta23P052E11P027C101F1_083.ab1        1   389 (49)  C BG274556Ta23P052E11P027C101R1_083.ab1   (62)   392     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BG274556Ta23P052E11P027C101R1_083.ab1   454 
  134    BG274556Ta23P052E11P027C101F1_083.ab1    72 
  138  C BG274556Ta23P052E11P027C101R1_083.ab1   317 
  178    BG274556Ta23P052E11P027C101F1_083.ab1   116 
  186  C BG274556Ta23P052E11P027C101R1_083.ab1   269 
  202    BG274556Ta23P052E11P027C101F1_083.ab1   140 
  210  C BG274556Ta23P052E11P027C101R1_083.ab1   245 
  230    BG274556Ta23P052E11P027C101F1_083.ab1   168 
  282  C BG274556Ta23P052E11P027C101R1_083.ab1   173 
  290    BG274556Ta23P052E11P027C101F1_083.ab1   228 
  370  C BG274556Ta23P052E11P027C101R1_083.ab1    85 
  378    BG274556Ta23P052E11P027C101F1_083.ab1   316 
Contig length: old 500, new 500

Contig length: old 500, new 500
New start: 0